Estimation of NAM-A1 haplotypes effect on the level of quantitative traits and grain protein content in wheat

  • O. A. Orlovskaya
  • S. I. Vakula
  • L. V. Khotyleva
  • A. V. Kilchevsky

Abstract

Aim. NAM-A1 gene plays an important role in the regulation of metabolic processes, the remobilization of nutrients from the wheat vegetative organs to grain. The aim of this work is the genotyping of SNP polymorphisms of the NAM-A1 gene in introgression lines derived from the cross of bread wheat varieties with species of genus Triticum, as well as estimation of NAM-A1 haplotypes effect on quantitative traits and grain protein content of the studied genotypes. Methods. NAM-A1 gene polymorphisms were identified using the TaqMan - Real-time PCR. Statistical data analysis was carried out using MS Excel 2007, Statistica 10.0. Results. NAM-A1c haplotype is mainly found in the studied genus Triticum species, NAM-A1d - in bread wheat varieties, and mixed haplotypes - in the introgression wheat lines. Statistically significant associations among NAM-A1 gene haplotypes and productive tillering of plants, the length of the main spike, the number of spikelets in the main spike and the thousand kernel weight were revealed. Conclusions. A significant effect of the NAM-A1 haplotypes was established for the traits «productive tillering» and «thousand kernel weight». The highest thousand kernel weight was reached in plants carrying the haplotype NAM-A1d.

Keywords: T. aestivum L., species of genus Triticum, NAM-A1, SNP, quantitative characters.

References

Olsen A.D., Ernst H.A., Leggio L.L., Skriver K. NAC transcription factors: structurally distinct, functionally diverse. Trends Plant Sci. 2005. Vol. 10 (2). P. 79–87. doi: 10.1016/j.tplants.2004.12.010.

Puranik S., Sahu P.P., Srivastava P.S., Prasad M. NAC proteins: regulation and role in stress tolerance. Trends Plant Sci. 2012. Vol. 17 (6). P. 369–381. doi:10.1016/j.tplants.2012.02.004.

Pearce S., Tabbita F., Cantu D., Buffalo V., Avni R., Vazquez-Gross H., Zhao R., Conley C.J., Distelfeld A., Dubcovksy J. Regulation of Zn and Fe transporters by the GPC1 gene during early wheat monocarpic senescence. BMC Plant Biology. 2014. Vol. 14. P. 368–391. doi: 10.1186/s12870-014-0368-2.

Podzimska-Sroka D., O’Shea C., Gragersen P.L., Skriver K. NAC transcription factors in senescence: from molecular structure to function in crops. Planta. 2015. Vol. 4 (3). P. 412–448. doi: 10.3390/plants4030412.

Uauy C., Distelfeld A., Fahima T., Blechl A., Dubcovsky J. A NAC gene regulating senescence improves grain protein, zinc, and iron content in wheat. Science. 2006. Vol. 314. P. 1298–1301. doi: 10.1126/science.1133649.

Kade M.A., Barneix J., Olmos S., Dubcovsky J. Nitrogen uptake and remobilization in tetraploid Langdon durum wheat and a recombinant substitution line with the high grain protein gene Gpc-B1. Plant Breeding. 2005. Vol. 124 (4). P. 343–349. doi: 10.1111/j.1439-0523.2005. 01110.x.

Uauy C., Brevis J.C., Dubcovsky J. The high grain protein content gene Gpc-B1 accelerates senescence and has pleiotropic effects on protein content in wheat. J. Exp. Bot. 2006. Vol. 57 (11). P. 2785–2794. doi:10.1093/jxb/erl047.

Hagenblad J., Aspland L., Balfourier F., Ravel C., Leino M.W. Strong presence of the high grain protein content allele NAM-B1 in Fennoscandian wheat. Theor. Appl. Genet. 2012. Vol. 125 (8). P. 1677–1686. doi: 10.1007/s00122-012-1943-2.

Avni R., Zhao R., Pearce S., Jun Y., Uauy C., Tabbita F., Fahima T., Slade A., Dubcovsky J., Distelfeld A. Functional characterization of GPC-1 genes in hexaploid wheat. Planta. 2014. Vol. 239 (2). P. 313–324. doi:10.1007/s00425-013-1977-y.

Cormier F., Throude M., Ravel C., Le Gouis J., Leveugle M., Lafarge S., Exbrayat F., Duranton N., Praud S. Detection of NAM-A1 natural variants in bread wheat reveals differences in haplotype distribution between a worldwide core collection and European elite germplasm. Agronomy. 2015. Vol. 5. P. 143–151. doi: 10.3390/agronomy5020143.

Yang R., Juhasz A., Zhang Y., Chen X., Zhang Y., She M., Zhang J., Maddern R., Edwards I., Diepeveen D., Islam S., Ma W. Molecular characterisation of the NAM-1 genes in bread wheat in Australia. Crop and Pasture Science. 2018. Vol. 69 (12). P. 1173–1181. doi: 10.1071/CP18273

Alhabbar Z., Yang R., Juhasz A., Xin H., She M., Anwar M., Sultana N., Diepeveen D., MaW., Islam S. NAM gene allelic composition and its relation to grain-filling duration and nitrogen utilisation efficiency of Australian wheat. PLoS ONE. 2018. Vol. 13 (10). e0205448. doi: 10.1371/journal.pone.0205448.