Model of cytokinin metabolism in wheat (Triticum aestivum L.) and identification of targets for pharmacological modulation of CKX to enhance grain productivity and stress tolerance

Keywords: cytokinin oxidase, TaCKX, wheat, CKX

Abstract

Aim. To develop a model of cytokinin metabolism in Triticum aestivum L. with identification of key pharmacological intervention points and substantiation of strategies to enhance productivity and stress tolerance through inhibition of cytokinin oxidase/dehydrogenase (CKX) enzymes. Methods. Systematic literature analysis, meta-analysis of inhibitor efficiency, conceptual modeling of the metabolic network, molecular docking (AutoDock Vina 1.2) of F-INCYDE and INCYDE to the structure of AtCKX2 (PDB: 1W5O), and analysis of application timing according to the BBCH scale. Results. A model of cytokinin metabolism was developed, including biosynthesis, transport/reception, and degradation. Four key intervention points were identified. The TaCKX gene family was shown to comprise multiple functional members with tissue-specific expression. F-INCYDE demonstrated higher binding affinity to AtCKX2 (ΔG = –8.4 kcal/mol) compared to INCYDE (ΔG = –7.9 kcal/mol). ZOGT was identified as a parallel target explaining the limited efficacy of INCYDE. Optimal application stages were determined (BBCH 31–39, 55–65, 71–77). Conclusions. Dual inhibition of CKX and ZOGT represents a promising strategy for regulating cytokinin homeostasis in wheat and requires further experimental validation.

References

Ashikari M., Sakakibara H., Lin S., Yamamoto T., Takashi T., Nishimura A., Angeles E. R., Qian Q., Kitano H., Matsuoka M. Cytokinin oxidase regulates rice grain production. Science. 2005. Vol. 309 (5735). P. 741–745. https://doi.org/10.1126/science.1113373.

Chen L., Zhao J., Song J., Jameson P. E. Cytokinin dehydrogenase: a genetic target for yield improvement in wheat. Plant Biotechnology Journal. 2020. Vol. 18 (3). P. 614–630. https://doi.org/10.1111/pbi.13305.

Cortleven A., Leuendorf J. E., Frank M., Pezzetta D., Bolt S., Schmülling Th. Cytokinin action in response to abiotic and biotic stresses in plants. Plant Cell Environment. 2019. Vol. 42 (3). P. 998–1018. https://doi.org/10.1111/pce.13494.

Eberhardt J., Santos-Martins D., Tillack A. F., Forli S. AutoDock Vina 1.2.0: New Docking Methods, Expanded Force Field, and Python Bindings. Journal of Chemical Information and Modeling. 2021. Vol. 61 (8). P. 3891–3898. https://doi.org/10.1021/acs.jcim.1c00203.

FAO. World Food and Agriculture – Statistical Yearbook 2023. Rome : FAO, 2023. 368 p. https://doi.org/10.4060/cc8166en.

Jablonski B., Ogonowska H., Szala K., Bajguz A., Orczyk W., Nadolska-Orczyk A. Silencing of TaCKX1 mediates expression of other TaCKX genes to increase yield parameters in wheat. International Journal of Molecular Sciences. 2020. Vol. 21 (13). P. 4809. https://doi.org/10.3390/ijms21134809.

Jameson P. E., Song J. Cytokinin: a key driver of seed yield. Journal of Experimental Botany. 2016. Vol. 67 (3). P. 593–606. https://doi.org/10.1093/jxb/erv461.

Jameson P. E., Song J. Field application of cytokinin oxidase inhibitors failed to enhance grain yield in wheat and barley. Plants (Basel). 2021. Vol. 10 (11). P. 2309. https://doi.org/10.3390/plants10112309.

Khablak S. H., Bondareva L. M., Dolia M. M., Spychak V. M., Lykholat T. Y., Sklyar T. V., Lykholat Y. V. Integrative model of plant immunity to pathogens and stresses: A multilevel signal-metabolic network. Regulatory Mechanisms in Biosystems. 2025. Vol. 16 (4). e25175. https://doi.org/10.15421/0225175.

Khablak S. H., Spivak S. I., Pastukhova N. L., Yemets A. I., Blume Yа. B. Cytokinin Oxidase/Dehydrogenase as an Important Target for Increasing Plant Productivity. Cytology and genetics. 2024. Vol. 58. P. 115–125. https://doi.org/10.3103/S0095452724020051.

Kieber J. J., Schaller G. E. Cytokinin signaling in plant development. Development. 2018. Vol. 145 (4). P. dev149344. https://doi.org/10.1242/dev.149344.

Ogonowska H., Barchacka K., Gasparis S., Jablonski B., Orczyk W., Dmochowska-Boguta M., Nadolska-Orczyk A. Specificity of expression of TaCKX family genes in developing plants of wheat and their co-operation within and among organs. PLoS ONE. 2019. Vol. 14 (4). P. e0214239. https://doi.org/10.1371/journal.pone.0214239.

Qian Q., Hu W., Bi Z., Li L., Wang K., Zhang X., Min D. The cytokinin oxidase/dehydrogenase TaCKX11-D positively regulates grain size in wheat. Journal of Experimental Botany. 2025. Vol. 76 (22). P. 6758–6775. https://doi.org/10.1093/jxb/eraf196.

Shoaib M., Yang W., Shan Q., Sun L., Wang D., Sajjad M., Li X., Sun J., Liu D., Zhan K., Zhang A. TaCKX gene family, at large, is associated with thousand-grain weight and plant height in common wheat. Theoretical and Applied Genetics. 2020. Vol. 133 (11). P. 3151–3163. https://doi.org/10.1007/s00122-020-03661-6.

Slafer G. A., Foulkes M. J., Reynolds M. P., Murchie E. H., Carmo-Silva E., Flavell R., Gwyn J., Sawkins M., Griffiths S. A “wiring diagram” for sink strength traits impacting wheat yield potential. Journal of Experimental Botany. 2023. Vol. 74 (1). P. 40–71. https://doi.org/10.1093/jxb/erac410.